Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | RHPLAN_RS02965 | Not Available | Negative | 622585 - 623187 | 22196.6 |
| 50s ribosomal protein l27 | RHPLAN_RS02970 | Not Available | Negative | 623343 - 623615 | 9516.45 |
| 50s ribosomal protein l21 | RHPLAN_RS02975 | Not Available | Negative | 623788 - 624183 | 14203.4 |
| abc transporter substrate-binding protein | RHPLAN_RS02980 | Not Available | Positive | 624543 - 625493 | 33950.7 |
| abc transporter permease | RHPLAN_RS02985 | Not Available | Positive | 625502 - 626365 | 31070.0 |
| abc transporter atp-binding protein | RHPLAN_RS02990 | Not Available | Positive | 626358 - 627137 | 28867.0 |
| alpha/beta hydrolase | RHPLAN_RS02995 | Not Available | Positive | 627274 - 628125 | 30901.2 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS03000 | Not Available | Positive | 628402 - 629376 | 33869.4 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS03005 | Not Available | Positive | 629413 - 630381 | 33428.0 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS03010 | Not Available | Positive | 630451 - 631434 | 34921.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.