Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS29310 | Not Available | Positive | 6267338 - 6268300 | 34197.7 |
| nad(p)-dependent oxidoreductase | RHPLAN_RS29315 | Not Available | Positive | 6268311 - 6269273 | 34862.1 |
| xaa-pro peptidase family protein | RHPLAN_RS29320 | Not Available | Positive | 6269428 - 6270651 | 45355.6 |
| cupin domain-containing protein | RHPLAN_RS29325 | Not Available | Positive | 6270685 - 6271083 | 14698.4 |
| gnat family n-acetyltransferase | RHPLAN_RS29330 | Not Available | Positive | 6271121 - 6271990 | 31536.1 |
| carboxylating nicotinate-nucleotide diphosphorylase | RHPLAN_RS29335 | Not Available | Negative | 6271997 - 6272815 | 29292.5 |
| abc transporter permease | RHPLAN_RS29340 | Not Available | Negative | 6272904 - 6273638 | 25650.8 |
| abc transporter permease | RHPLAN_RS29345 | Not Available | Negative | 6273635 - 6274384 | 26765.9 |
| abc transporter atp-binding protein | RHPLAN_RS29350 | Not Available | Negative | 6274381 - 6275259 | 31416.9 |
| abc transporter substrate-binding protein | RHPLAN_RS29355 | Not Available | Negative | 6275307 - 6276281 | 34415.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.