Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-hydroxyphenylacetate 3-hydroxylase family proteinRHPLAN_RS29260Not AvailableNegative6253866 - 625533855413.1
marr family winged helix-turn-helix transcriptional regulatorRHPLAN_RS29265Not AvailableNegative6255354 - 625595621903.5
arylmalonate decarboxylaseRHPLAN_RS29270Not AvailablePositive6256129 - 625687227525.3
cupinRHPLAN_RS29275Not AvailableNegative6257037 - 625741713978.5
eal domain-containing proteinRHPLAN_RS29280Not AvailableNegative6257493 - 626002193466.7
substrate-binding domain-containing proteinRHPLAN_RS29285Not AvailableNegative6260028 - 626082228107.7
hypothetical proteinRHPLAN_RS29290Not AvailablePositive6261100 - 62613458315.16
pep/pyruvate-binding domain-containing proteinRHPLAN_RS29295Not AvailableNegative6261370 - 6265398146666.0
2-phospho-l-lactate guanylyltransferaseRHPLAN_RS29300Not AvailablePositive6265851 - 626646821988.6
tetr family transcriptional regulatorRHPLAN_RS29305Not AvailableNegative6266476 - 626719827230.1

Displaying genes 5991 – 6000 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.