Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RHPLAN_RS02915 | Not Available | Negative | 612800 - 613045 | 8510.53 |
| glutamate 5-kinase | RHPLAN_RS02920 | Not Available | Negative | 613191 - 614333 | 40146.2 |
| lysr family transcriptional regulator | RHPLAN_RS02925 | Not Available | Negative | 614405 - 615319 | 33256.4 |
| sdr family oxidoreductase | RHPLAN_RS02930 | Not Available | Positive | 615433 - 616173 | 25577.8 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | RHPLAN_RS02935 | Not Available | Positive | 616336 - 617004 | 23923.7 |
| gtpase obge | RHPLAN_RS02940 | Not Available | Negative | 617048 - 618091 | 37181.5 |
| dmt family transporter | RHPLAN_RS02945 | Not Available | Positive | 618162 - 619073 | 32421.4 |
| rhodanese-like domain-containing protein | RHPLAN_RS02950 | Not Available | Negative | 619242 - 620810 | 56598.8 |
| hypothetical protein | RHPLAN_RS02955 | Not Available | Negative | 620896 - 621438 | 20608.5 |
| fmn-binding negative transcriptional regulator | RHPLAN_RS02960 | Not Available | Negative | 621930 - 622571 | 23705.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.