Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome bRHPLAN_RS00250Not AvailableNegative55896 - 5645020304.4
ribose-phosphate pyrophosphokinaseRHPLAN_RS00255Not AvailableNegative56596 - 5750732962.7
thymidine phosphorylase family proteinRHPLAN_RS00260Not AvailableNegative57504 - 5903954454.4
mbl fold metallo-hydrolase rna specificity domain-containing proteinRHPLAN_RS00265Not AvailableNegative59036 - 6039449017.1
universal stress proteinRHPLAN_RS00270Not AvailableNegative60447 - 6127429526.7
nad(p)h-dependent oxidoreductaseRHPLAN_RS00275Not AvailableNegative61401 - 6197921680.7
cbs domain-containing proteinRHPLAN_RS00280Not AvailableNegative62019 - 6275327216.0
is5/is1182 family transposaseRHPLAN_RS00285Not AvailablePositive62908 - 6389134865.2
hypothetical proteinRHPLAN_RS00290Not AvailablePositive63985 - 6437714851.5
bifunctional acetate--coa ligase family protein/gnat family n-acetyltransferaseRHPLAN_RS00295Not AvailableNegative64440 - 6714295631.9

Displaying genes 51 – 60 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.