Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coce/nond family hydrolase | RHPLAN_RS29210 | Not Available | Positive | 6243189 - 6244934 | 65947.5 |
| llm class flavin-dependent oxidoreductase | RHPLAN_RS29215 | Not Available | Negative | 6245243 - 6246682 | 52959.0 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS29220 | Not Available | Positive | 6246713 - 6247690 | 34323.4 |
| hypothetical protein | RHPLAN_RS29225 | Not Available | Negative | 6247725 - 6247919 | 7124.76 |
| nadp-dependent oxidoreductase | RHPLAN_RS29230 | Not Available | Negative | 6248075 - 6248962 | 30678.8 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS29235 | Not Available | Negative | 6249069 - 6250034 | 34987.4 |
| hypothetical protein | RHPLAN_RS39820 | Not Available | Positive | 6250273 - 6251310 | 36678.7 |
| hypothetical protein | RHPLAN_RS29245 | Not Available | Positive | 6251588 - 6251788 | 7432.84 |
| hypothetical protein | RHPLAN_RS29250 | Not Available | Positive | 6251772 - 6252083 | 11765.3 |
| lysr family transcriptional regulator | RHPLAN_RS29255 | Not Available | Negative | 6252166 - 6253008 | 30599.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.