Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| caib/baif coa-transferase family protein | RHPLAN_RS29160 | Not Available | Positive | 6231952 - 6233175 | 43917.2 |
| hypothetical protein | RHPLAN_RS29165 | Not Available | Positive | 6233416 - 6233859 | 14594.9 |
| hypothetical protein | RHPLAN_RS29170 | Not Available | Negative | 6233902 - 6234222 | 11754.0 |
| thiolase family protein | RHPLAN_RS29175 | Not Available | Negative | 6234219 - 6235373 | 40704.7 |
| coce/nond family hydrolase | RHPLAN_RS29180 | Not Available | Positive | 6235578 - 6237311 | 64831.8 |
| gfo/idh/moca family protein | RHPLAN_RS29185 | Not Available | Positive | 6237532 - 6238542 | 36035.2 |
| 3-keto-5-aminohexanoate cleavage protein | RHPLAN_RS29190 | Not Available | Positive | 6238576 - 6239457 | 33027.8 |
| aldo/keto reductase | RHPLAN_RS29195 | Not Available | Positive | 6239587 - 6240510 | 33679.3 |
| fad binding domain-containing protein | RHPLAN_RS29200 | Not Available | Positive | 6240520 - 6241758 | 45777.5 |
| abc transporter substrate-binding protein | RHPLAN_RS29205 | Not Available | Negative | 6241882 - 6242889 | 35265.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.