Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | RHPLAN_RS29060 | Not Available | Negative | 6210591 - 6211601 | 37776.9 |
| aryl-sulfate sulfotransferase | RHPLAN_RS29065 | Not Available | Negative | 6211702 - 6212772 | 40628.2 |
| marr family winged helix-turn-helix transcriptional regulator | RHPLAN_RS29070 | Not Available | Negative | 6212777 - 6213304 | 19910.9 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS29075 | Not Available | Positive | 6213435 - 6214427 | 35350.0 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS29080 | Not Available | Negative | 6214436 - 6215410 | 33130.0 |
| abc transporter atp-binding protein | RHPLAN_RS29085 | Not Available | Positive | 6215616 - 6216542 | 34268.5 |
| abc transporter permease | RHPLAN_RS29090 | Not Available | Positive | 6216539 - 6217300 | 27998.3 |
| acyltransferase | RHPLAN_RS29095 | Not Available | Positive | 6217361 - 6218323 | 35174.6 |
| mfs transporter | RHPLAN_RS29100 | Not Available | Negative | 6218329 - 6219597 | 43790.7 |
| llm class flavin-dependent oxidoreductase | RHPLAN_RS29105 | Not Available | Negative | 6219598 - 6220653 | 38492.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.