Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 4-epimerase gale | RHPLAN_RS28910 | Not Available | Positive | 6171054 - 6172043 | 35655.4 |
| family 16 glycosylhydrolase | RHPLAN_RS28915 | Not Available | Positive | 6172487 - 6177430 | 169250.0 |
| acyltransferase | RHPLAN_RS28920 | Not Available | Positive | 6177762 - 6179027 | 46537.9 |
| vanz family protein | RHPLAN_RS28925 | Not Available | Positive | 6179142 - 6179543 | 14068.7 |
| glycosyltransferase family 4 protein | RHPLAN_RS28930 | Not Available | Positive | 6179627 - 6180850 | 44896.9 |
| c-type cytochrome | RHPLAN_RS28935 | Not Available | Negative | 6180896 - 6181465 | 20400.7 |
| carboxypeptidase regulatory-like domain-containing protein | RHPLAN_RS28940 | Not Available | Positive | 6181677 - 6183323 | 62099.7 |
| b12-binding domain-containing radical sam protein | RHPLAN_RS28945 | Not Available | Negative | 6183339 - 6184958 | 60107.7 |
| antar domain-containing response regulator | RHPLAN_RS28950 | Not Available | Positive | 6185228 - 6185812 | 21869.6 |
| cmpa/nrta family abc transporter substrate-binding protein | RHPLAN_RS28955 | Not Available | Positive | 6185809 - 6187002 | 42393.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.