Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RHPLAN_RS28860 | Not Available | Negative | 6162196 - 6162849 | 23552.5 |
| hypothetical protein | RHPLAN_RS28865 | Not Available | Negative | 6162936 - 6163193 | 9575.61 |
| hypothetical protein | RHPLAN_RS28870 | Not Available | Positive | 6164252 - 6165547 | 44850.9 |
| fkbm family methyltransferase | RHPLAN_RS38685 | Not Available | Positive | 6165656 - 6166396 | 28141.9 |
| transglutaminase-like cysteine peptidase | RHPLAN_RS28880 | Not Available | Negative | 6166535 - 6167371 | 30542.7 |
| metallophosphoesterase family protein | RHPLAN_RS28885 | Not Available | Positive | 6167543 - 6168283 | 27829.6 |
| hypothetical protein | RHPLAN_RS39810 | Not Available | Positive | 6168380 - 6169066 | 24590.2 |
| hypothetical protein | RHPLAN_RS28895 | Not Available | Negative | 6169193 - 6169435 | 8993.08 |
| hypothetical protein | RHPLAN_RS39815 | Not Available | Negative | 6169459 - 6169836 | 13314.3 |
| transglutaminase-like cysteine peptidase | RHPLAN_RS28905 | Not Available | Negative | 6170109 - 6170789 | 25581.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.