Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf6789 family proteinRHPLAN_RS28635Not AvailableNegative6098414 - 609888417211.6
hypothetical proteinRHPLAN_RS28640Not AvailableNegative6098888 - 609939418106.5
hypothetical proteinRHPLAN_RS28645Not AvailableNegative6099394 - 609990619079.4
duf2892 domain-containing proteinRHPLAN_RS38645Not AvailableNegative6099962 - 61001717405.31
yeee/yede thiosulfate transporter family proteinRHPLAN_RS28650Not AvailableNegative6100208 - 610082521206.6
yeee/yede thiosulfate transporter family proteinRHPLAN_RS28655Not AvailableNegative6100839 - 610136017876.1
dmt family transporterRHPLAN_RS28660Not AvailableNegative6101592 - 610264136902.1
hypothetical proteinRHPLAN_RS28665Not AvailableNegative6102749 - 610368734976.6
hlyd family type i secretion periplasmic adaptor subunitRHPLAN_RS28670Not AvailableNegative6104102 - 610552652506.3
type i secretion system permease/atpaseRHPLAN_RS28675Not AvailableNegative6105533 - 610724861885.9

Displaying genes 5861 – 5870 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.