Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RHPLAN_RS28550 | Not Available | Negative | 6079794 - 6079997 | 6928.54 |
| hypothetical protein | RHPLAN_RS39770 | Not Available | Negative | 6080857 - 6081033 | 6072.26 |
| hypothetical protein | RHPLAN_RS39775 | Not Available | Positive | 6081130 - 6081303 | 6287.73 |
| phosphatase pap2 family protein | RHPLAN_RS28555 | Not Available | Negative | 6081487 - 6082401 | 33471.6 |
| hypothetical protein | RHPLAN_RS28560 | Not Available | Negative | 6082636 - 6082839 | 6951.58 |
| is5/is1182 family transposase | RHPLAN_RS39780 | Not Available | Negative | 6083956 - 6084042 | 3336.0 |
| hypothetical protein | RHPLAN_RS39785 | Not Available | Positive | 6084071 - 6084238 | 6273.47 |
| duf2939 domain-containing protein | RHPLAN_RS28570 | Not Available | Positive | 6084694 - 6085275 | 21401.0 |
| hypothetical protein | RHPLAN_RS28575 | Not Available | Positive | 6085470 - 6085670 | 7527.0 |
| hypothetical protein | RHPLAN_RS28580 | Not Available | Negative | 6085687 - 6086016 | 11697.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.