Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| erf family protein | RHPLAN_RS28455 | Not Available | Negative | 6060275 - 6061342 | 38764.3 |
| yqaj viral recombinase family protein | RHPLAN_RS28460 | Not Available | Negative | 6061326 - 6062189 | 32581.8 |
| helix-turn-helix transcriptional regulator | RHPLAN_RS38635 | Not Available | Positive | 6062236 - 6062496 | 9141.16 |
| hypothetical protein | RHPLAN_RS28470 | Not Available | Positive | 6062769 - 6063977 | 43443.6 |
| hypothetical protein | RHPLAN_RS39765 | Not Available | Negative | 6064130 - 6064591 | 16373.6 |
| sterol desaturase family protein | RHPLAN_RS28475 | Not Available | Negative | 6065198 - 6066052 | 32668.7 |
| isoprenylcysteine carboxylmethyltransferase family protein | RHPLAN_RS28480 | Not Available | Positive | 6066363 - 6067064 | 25599.2 |
| hypothetical protein | RHPLAN_RS28485 | Not Available | Negative | 6067787 - 6068275 | 17726.0 |
| tetratricopeptide repeat protein | RHPLAN_RS28490 | Not Available | Negative | 6068371 - 6068910 | 19949.9 |
| hypothetical protein | RHPLAN_RS28495 | Not Available | Negative | 6068988 - 6069386 | 14132.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.