Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS28395 | Not Available | Negative | 6050886 - 6051827 | 33098.4 |
| lysr family transcriptional regulator | RHPLAN_RS28400 | Not Available | Positive | 6051986 - 6052957 | 35703.5 |
| hypothetical protein | RHPLAN_RS28405 | Not Available | Positive | 6053866 - 6054114 | 8686.02 |
| hypothetical protein | RHPLAN_RS28420 | Not Available | Negative | 6055996 - 6056223 | 8490.25 |
| hypothetical protein | RHPLAN_RS28425 | Not Available | Negative | 6057365 - 6057595 | 8579.13 |
| hypothetical protein | RHPLAN_RS28430 | Not Available | Negative | 6058005 - 6058226 | 7882.7 |
| csbd family protein | RHPLAN_RS28435 | Not Available | Negative | 6058463 - 6058636 | 6016.14 |
| hypothetical protein | RHPLAN_RS28440 | Not Available | Positive | 6059002 - 6059334 | 12366.8 |
| hypothetical protein | RHPLAN_RS28445 | Not Available | Positive | 6059341 - 6059700 | 13061.3 |
| helix-turn-helix transcriptional regulator | RHPLAN_RS28450 | Not Available | Negative | 6059886 - 6060269 | 14445.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.