Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | RHPLAN_RS38625 | Not Available | Positive | 6037391 - 6038245 | 30978.1 |
| hypothetical protein | RHPLAN_RS28365 | Not Available | Positive | 6038346 - 6038564 | 8153.89 |
| hypothetical protein | RHPLAN_RS28370 | Not Available | Negative | 6038680 - 6038862 | 6095.29 |
| hypothetical protein | RHPLAN_RS39740 | Not Available | Positive | 6039329 - 6039493 | 6522.82 |
| hypothetical protein | RHPLAN_RS39745 | Not Available | Negative | 6039583 - 6039918 | 12285.6 |
| hypothetical protein | RHPLAN_RS39750 | Not Available | Negative | 6039968 - 6040117 | 5216.27 |
| hypothetical protein | RHPLAN_RS39755 | Not Available | Positive | 6040461 - 6040724 | 10112.9 |
| hggxstg domain-containing protein | RHPLAN_RS40265 | Not Available | Positive | 6041538 - 6042533 | 35762.2 |
| vcbs domain-containing protein | RHPLAN_RS28375 | Not Available | Negative | 6043152 - 6047258 | 138870.0 |
| methyltransferase | RHPLAN_RS28390 | Not Available | Negative | 6049829 - 6050854 | 37236.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.