Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhRHPLAN_RS02815Not AvailableNegative593127 - 59360917851.6
ribosome silencing factorRHPLAN_RS02820Not AvailableNegative593616 - 59390910578.8
nicotinate-nucleotide adenylyltransferaseRHPLAN_RS02825Not AvailableNegative594119 - 59469721913.9
glutamate-5-semialdehyde dehydrogenaseRHPLAN_RS02830Not AvailableNegative594929 - 59622745335.5
lysr family transcriptional regulatorRHPLAN_RS02835Not AvailablePositive596557 - 59749234043.2
dihydrodipicolinate synthase family proteinRHPLAN_RS02840Not AvailablePositive597604 - 59858737003.7
3-hydroxyanthranilate 3,4-dioxygenaseRHPLAN_RS02845Not AvailablePositive598603 - 59915120697.7
tripartite tricarboxylate transporter substrate binding proteinRHPLAN_RS02850Not AvailablePositive599223 - 60019134244.6
4,5-dihydroxyphthalate decarboxylaseRHPLAN_RS02855Not AvailableNegative600341 - 60132437828.5
n-acyl homoserine lactonase family proteinRHPLAN_RS02860Not AvailableNegative601393 - 60215127988.8

Displaying genes 571 – 580 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.