Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family a protein | RHPLAN_RS28170 | Not Available | Negative | 5983955 - 5984638 | 25558.8 |
| glycosyltransferase family a protein | RHPLAN_RS28175 | Not Available | Negative | 5984635 - 5985375 | 27314.6 |
| hypothetical protein | RHPLAN_RS39720 | Not Available | Negative | 5985491 - 5987422 | 70940.7 |
| gmc oxidoreductase | RHPLAN_RS28185 | Not Available | Negative | 5987699 - 5988736 | 37438.1 |
| degt/dnrj/eryc1/strs aminotransferase family protein | RHPLAN_RS28190 | Not Available | Negative | 5989382 - 5990695 | 47369.0 |
| pqqd family protein | RHPLAN_RS28195 | Not Available | Negative | 5990804 - 5991256 | 16733.6 |
| glycosyltransferase family 25 protein | RHPLAN_RS28200 | Not Available | Negative | 5991507 - 5992244 | 27547.8 |
| flp family type ivb pilin | RHPLAN_RS38600 | Not Available | Negative | 5992522 - 5992719 | 6700.2 |
| tade/tadg family type iv pilus assembly protein | RHPLAN_RS28210 | Not Available | Negative | 5993020 - 5994372 | 46518.7 |
| pilz domain-containing protein | RHPLAN_RS28215 | Not Available | Negative | 5994482 - 5994811 | 12526.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.