Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa hydrolase/transferase c-terminal domain-containing protein | RHPLAN_RS28125 | Not Available | Negative | 5968690 - 5970555 | 67457.3 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | RHPLAN_RS28130 | Not Available | Negative | 5970552 - 5972669 | 76926.4 |
| acetyl-coa c-acetyltransferase | RHPLAN_RS28135 | Not Available | Negative | 5972681 - 5973961 | 45730.1 |
| acyl-coa dehydrogenase | RHPLAN_RS28140 | Not Available | Negative | 5973964 - 5976249 | 83318.1 |
| yiix/yebb-like n1pc/p60 family cysteine hydrolase | RHPLAN_RS28145 | Not Available | Positive | 5976425 - 5977222 | 29511.4 |
| acyl-coa thioesterase | RHPLAN_RS28150 | Not Available | Negative | 5977233 - 5977658 | 14930.9 |
| glutathione-dependent disulfide-bond oxidoreductase | RHPLAN_RS28155 | Not Available | Negative | 5977900 - 5978766 | 32582.7 |
| radical sam protein | RHPLAN_RS28160 | Not Available | Negative | 5979670 - 5980653 | 36990.9 |
| glycosyltransferase family a protein | RHPLAN_RS38595 | Not Available | Negative | 5980687 - 5981721 | 38132.8 |
| glycosyltransferase | RHPLAN_RS28165 | Not Available | Positive | 5982028 - 5983854 | 67732.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.