Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | RHPLAN_RS28080 | Not Available | Negative | 5955442 - 5956356 | 33369.0 |
| glycosyltransferase | RHPLAN_RS28085 | Not Available | Negative | 5956346 - 5957284 | 34837.2 |
| hypothetical protein | RHPLAN_RS28090 | Not Available | Negative | 5957291 - 5958451 | 44389.0 |
| hypothetical protein | RHPLAN_RS28095 | Not Available | Negative | 5958581 - 5959036 | 16557.4 |
| wzz/fepe/etk n-terminal domain-containing protein | RHPLAN_RS28100 | Not Available | Positive | 5959555 - 5961750 | 79540.7 |
| oligosaccharide flippase family protein | RHPLAN_RS28105 | Not Available | Positive | 5961837 - 5963273 | 50091.2 |
| acyltransferase | RHPLAN_RS28110 | Not Available | Positive | 5963317 - 5964438 | 41480.6 |
| hypothetical protein | RHPLAN_RS39715 | Not Available | Positive | 5964639 - 5964935 | 11164.4 |
| hypothetical protein | RHPLAN_RS28115 | Not Available | Positive | 5965631 - 5967109 | 53321.9 |
| aldehyde dehydrogenase family protein | RHPLAN_RS28120 | Not Available | Negative | 5967122 - 5968570 | 51036.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.