Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinRHPLAN_RS27980Not AvailablePositive5931370 - 593186416898.8
methyl-accepting chemotaxis proteinRHPLAN_RS27985Not AvailableNegative5931936 - 593398472588.4
3'(2'),5'-bisphosphate nucleotidase cysqRHPLAN_RS27990Not AvailablePositive5934558 - 593535528483.0
sulfate adenylyltransferase subunit cysdRHPLAN_RS27995Not AvailablePositive5935429 - 593635235300.9
sulfate adenylyltransferase subunit cysnRHPLAN_RS28000Not AvailablePositive5936352 - 593823568842.3
dtdp-4-dehydrorhamnose reductaseRHPLAN_RS28005Not AvailableNegative5938232 - 593914032203.7
dtdp-4-dehydrorhamnose 3,5-epimeraseRHPLAN_RS28010Not AvailableNegative5939185 - 593975120895.0
glucose-1-phosphate thymidylyltransferase rfbaRHPLAN_RS28015Not AvailablePositive5939861 - 594075432602.4
dtdp-glucose 4,6-dehydrataseRHPLAN_RS28020Not AvailablePositive5940756 - 594184140695.1
wecb/taga/cpsf family glycosyltransferaseRHPLAN_RS28025Not AvailableNegative5942382 - 594312827747.8

Displaying genes 5721 – 5730 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.