Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isocitrate/isopropylmalate dehydrogenase family protein | RHPLAN_RS27880 | Not Available | Positive | 5909132 - 5910184 | 37974.4 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS27885 | Not Available | Positive | 5910220 - 5911194 | 34492.1 |
| acyl-coa dehydrogenase family protein | RHPLAN_RS27890 | Not Available | Positive | 5911204 - 5912409 | 43395.8 |
| acyl-coa dehydrogenase family protein | RHPLAN_RS27895 | Not Available | Positive | 5912421 - 5913626 | 44441.0 |
| carboxymuconolactone decarboxylase family protein | RHPLAN_RS27900 | Not Available | Positive | 5913837 - 5914220 | 13806.0 |
| dodecin family protein | RHPLAN_RS27905 | Not Available | Positive | 5914331 - 5914552 | 8118.75 |
| glutathione s-transferase family protein | RHPLAN_RS27910 | Not Available | Negative | 5914705 - 5915319 | 22853.5 |
| nad(p)-dependent oxidoreductase | RHPLAN_RS27915 | Not Available | Negative | 5915386 - 5916264 | 30946.6 |
| gfo/idh/moca family protein | RHPLAN_RS27920 | Not Available | Positive | 5916358 - 5917338 | 34533.3 |
| alpha-hydroxy acid oxidase | RHPLAN_RS27925 | Not Available | Positive | 5917359 - 5918489 | 41236.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.