Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubid family decarboxylase | RHPLAN_RS27780 | Not Available | Positive | 5886223 - 5887692 | 53508.1 |
| hlyd family secretion protein | RHPLAN_RS27785 | Not Available | Negative | 5887699 - 5888787 | 38128.9 |
| abc transporter atp-binding protein | RHPLAN_RS27790 | Not Available | Negative | 5888784 - 5889512 | 26096.7 |
| abc transporter permease | RHPLAN_RS27795 | Not Available | Negative | 5889509 - 5890645 | 40601.7 |
| acyltransferase | RHPLAN_RS27800 | Not Available | Negative | 5890687 - 5891916 | 45067.2 |
| duf2147 domain-containing protein | RHPLAN_RS27805 | Not Available | Positive | 5892226 - 5892852 | 22629.0 |
| acyl-coa dehydrogenase family protein | RHPLAN_RS27810 | Not Available | Negative | 5892901 - 5894067 | 42548.4 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS27815 | Not Available | Negative | 5894086 - 5895060 | 34453.4 |
| s9 family peptidase | RHPLAN_RS27820 | Not Available | Positive | 5895201 - 5896364 | 43071.3 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS27825 | Not Available | Positive | 5896570 - 5897553 | 34613.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.