Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s10 family peptidase | RHPLAN_RS27630 | Not Available | Positive | 5854802 - 5856370 | 56539.9 |
| response regulator | RHPLAN_RS27635 | Not Available | Negative | 5856373 - 5856738 | 12979.7 |
| ethanolamine ammonia-lyase reactivating factor euta | RHPLAN_RS27640 | Not Available | Positive | 5856959 - 5858686 | 62808.9 |
| nad(p)/fad-dependent oxidoreductase | RHPLAN_RS27645 | Not Available | Positive | 5858698 - 5859927 | 44430.1 |
| thiamine pyrophosphate-dependent enzyme | RHPLAN_RS27650 | Not Available | Negative | 5859928 - 5860503 | 20007.3 |
| thiamine pyrophosphate-binding protein | RHPLAN_RS27655 | Not Available | Negative | 5860500 - 5861036 | 19403.7 |
| voc family protein | RHPLAN_RS27660 | Not Available | Negative | 5861071 - 5861988 | 33229.9 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS27665 | Not Available | Positive | 5862078 - 5863058 | 34245.7 |
| class i adenylate-forming enzyme family protein | RHPLAN_RS27670 | Not Available | Negative | 5863196 - 5864719 | 55677.9 |
| c-type cytochrome | RHPLAN_RS27675 | Not Available | Negative | 5864720 - 5865658 | 32999.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.