Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2147 domain-containing protein | RHPLAN_RS27580 | Not Available | Positive | 5844688 - 5845122 | 15477.6 |
| urease subunit alpha | RHPLAN_RS27585 | Not Available | Negative | 5845138 - 5846847 | 60864.4 |
| urease subunit beta | RHPLAN_RS27590 | Not Available | Negative | 5847130 - 5847435 | 11244.8 |
| urease subunit gamma | RHPLAN_RS27595 | Not Available | Negative | 5847446 - 5847748 | 11041.7 |
| urease accessory protein ured | RHPLAN_RS27600 | Not Available | Negative | 5847771 - 5848595 | 28855.6 |
| urea abc transporter atp-binding subunit urte | RHPLAN_RS27605 | Not Available | Negative | 5848603 - 5849298 | 25316.8 |
| urea abc transporter atp-binding protein urtd | RHPLAN_RS27610 | Not Available | Negative | 5849437 - 5850189 | 27857.5 |
| urea abc transporter permease subunit urtc | RHPLAN_RS27615 | Not Available | Negative | 5850193 - 5851362 | 42167.1 |
| urea abc transporter permease subunit urtb | RHPLAN_RS27620 | Not Available | Negative | 5851365 - 5852882 | 53848.7 |
| urea abc transporter substrate-binding protein | RHPLAN_RS27625 | Not Available | Negative | 5853182 - 5854495 | 48137.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.