Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RHPLAN_RS27490 | Not Available | Positive | 5825342 - 5825554 | 7494.09 |
| abc transporter atp-binding protein | RHPLAN_RS27495 | Not Available | Negative | 5825643 - 5826347 | 25017.8 |
| abc transporter atp-binding protein | RHPLAN_RS27500 | Not Available | Negative | 5826347 - 5827081 | 26230.3 |
| branched-chain amino acid abc transporter permease | RHPLAN_RS27505 | Not Available | Negative | 5827084 - 5828097 | 36877.2 |
| branched-chain amino acid abc transporter permease | RHPLAN_RS27510 | Not Available | Negative | 5828094 - 5828966 | 30275.7 |
| abc transporter substrate-binding protein | RHPLAN_RS27515 | Not Available | Negative | 5829092 - 5830342 | 44528.6 |
| marr family winged helix-turn-helix transcriptional regulator | RHPLAN_RS27520 | Not Available | Positive | 5830420 - 5831097 | 24817.0 |
| glycosyltransferase family 2 protein | RHPLAN_RS27525 | Not Available | Positive | 5831381 - 5832376 | 36938.9 |
| polysaccharide biosynthesis c-terminal domain-containing protein | RHPLAN_RS27530 | Not Available | Positive | 5832392 - 5833771 | 49642.5 |
| amidase | RHPLAN_RS27535 | Not Available | Negative | 5833943 - 5835244 | 44840.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.