Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RHPLAN_RS27440 | Not Available | Positive | 5815545 - 5815832 | 9220.62 |
| lipopolysaccharide heptosyltransferase i | RHPLAN_RS27445 | Not Available | Negative | 5815900 - 5816856 | 34413.7 |
| udp-glucose 4-epimerase gale | RHPLAN_RS27450 | Not Available | Positive | 5817011 - 5818021 | 36187.2 |
| abc transporter atp-binding protein | RHPLAN_RS27455 | Not Available | Positive | 5818154 - 5819962 | 66006.4 |
| cytochrome p460 family protein | RHPLAN_RS27460 | Not Available | Positive | 5820365 - 5820919 | 19763.5 |
| fumarylacetoacetate hydrolase family protein | RHPLAN_RS27465 | Not Available | Positive | 5821123 - 5821830 | 25358.8 |
| glycosyltransferase | RHPLAN_RS27470 | Not Available | Positive | 5822017 - 5823114 | 40970.5 |
| radical sam protein | RHPLAN_RS27475 | Not Available | Positive | 5823206 - 5824162 | 36086.9 |
| hypothetical protein | RHPLAN_RS27480 | Not Available | Negative | 5824349 - 5824699 | 12653.5 |
| hypothetical protein | RHPLAN_RS27485 | Not Available | Negative | 5824802 - 5825074 | 9004.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.