Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-antigen ligase | RHPLAN_RS27340 | Not Available | Negative | 5792274 - 5793446 | 42237.8 |
| sis domain-containing protein | RHPLAN_RS27345 | Not Available | Positive | 5793756 - 5794763 | 35176.0 |
| glycosyltransferase family 4 protein | RHPLAN_RS27350 | Not Available | Positive | 5794794 - 5795906 | 39621.0 |
| glycosyltransferase family 4 protein | RHPLAN_RS27355 | Not Available | Positive | 5795914 - 5796936 | 35964.1 |
| nad-dependent epimerase/dehydratase family protein | RHPLAN_RS27360 | Not Available | Positive | 5796933 - 5797850 | 31960.8 |
| outer membrane protein | RHPLAN_RS27365 | Not Available | Negative | 5797969 - 5798811 | 29419.4 |
| sgnh/gdsl hydrolase family protein | RHPLAN_RS27370 | Not Available | Negative | 5799023 - 5800159 | 43386.4 |
| molybdopterin cofactor-binding domain-containing protein | RHPLAN_RS27375 | Not Available | Negative | 5800186 - 5802381 | 78308.4 |
| (2fe-2s)-binding protein | RHPLAN_RS27380 | Not Available | Negative | 5802384 - 5802836 | 16160.6 |
| glycosyltransferase family 2 protein | RHPLAN_RS27385 | Not Available | Negative | 5802992 - 5803822 | 30919.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.