Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hsp20 family protein | RHPLAN_RS02725 | Not Available | Negative | 573950 - 574405 | 17130.2 |
| hypothetical protein | RHPLAN_RS02730 | Not Available | Positive | 574737 - 575084 | 12874.3 |
| hypothetical protein | RHPLAN_RS02735 | Not Available | Positive | 575093 - 575380 | 10193.2 |
| hypothetical protein | RHPLAN_RS38945 | Not Available | Positive | 575383 - 575556 | 6352.71 |
| glycosyltransferase family 2 protein | RHPLAN_RS38095 | Not Available | Positive | 575963 - 576823 | 33561.7 |
| aldolase/citrate lyase family protein | RHPLAN_RS02740 | Not Available | Negative | 576797 - 577621 | 30093.8 |
| cupin domain-containing protein | RHPLAN_RS02745 | Not Available | Negative | 577631 - 578137 | 18570.0 |
| f0f1 atp synthase subunit delta | RHPLAN_RS02750 | Not Available | Positive | 578953 - 579516 | 20204.6 |
| f0f1 atp synthase subunit alpha | RHPLAN_RS02755 | Not Available | Positive | 579516 - 581045 | 55249.9 |
| f0f1 atp synthase subunit gamma | RHPLAN_RS02760 | Not Available | Positive | 581135 - 582010 | 31797.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.