Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination/antitermination protein nusg | RHPLAN_RS27295 | Not Available | Negative | 5781954 - 5782463 | 19032.1 |
| winged helix-turn-helix transcriptional regulator | RHPLAN_RS27300 | Not Available | Negative | 5782460 - 5783104 | 22932.6 |
| sgnh/gdsl hydrolase family protein | RHPLAN_RS27305 | Not Available | Negative | 5784158 - 5785246 | 39405.9 |
| class i sam-dependent methyltransferase | RHPLAN_RS27310 | Not Available | Negative | 5785272 - 5786018 | 27650.6 |
| udp-glucose 4-epimerase gale | RHPLAN_RS27315 | Not Available | Negative | 5786018 - 5787001 | 35573.6 |
| carbamoyltransferase | RHPLAN_RS27320 | Not Available | Negative | 5787039 - 5788871 | 67849.2 |
| duf5989 family protein | RHPLAN_RS40260 | Not Available | Negative | 5788891 - 5789040 | 5780.58 |
| hypothetical protein | RHPLAN_RS27325 | Not Available | Negative | 5789051 - 5789482 | 16476.4 |
| class i sam-dependent methyltransferase | RHPLAN_RS27330 | Not Available | Negative | 5789479 - 5790228 | 27196.9 |
| nucleoside-diphosphate sugar epimerase/dehydratase | RHPLAN_RS27335 | Not Available | Negative | 5790248 - 5792152 | 69434.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.