Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
degt/dnrj/eryc1/strs aminotransferase family proteinRHPLAN_RS27245Not AvailableNegative5771873 - 577316246463.8
pseudaminic acid synthaseRHPLAN_RS27250Not AvailableNegative5773159 - 577422637471.9
udp-2,4-diacetamido-2,4, 6-trideoxy-beta-l-altropyranose hydrolaseRHPLAN_RS27255Not AvailableNegative5774223 - 577567450596.6
pseudaminic acid biosynthesis-associated methylaseRHPLAN_RS27260Not AvailableNegative5775671 - 577630323730.2
cytidylyltransferase domain-containing proteinRHPLAN_RS27265Not AvailableNegative5776317 - 577704526142.2
imidazole glycerol phosphate synthase subunit hisfRHPLAN_RS27270Not AvailableNegative5777047 - 577780226799.4
imidazole glycerol phosphate synthase subunit hishRHPLAN_RS27275Not AvailableNegative5777812 - 577845022586.1
n-acetyl sugar amidotransferaseRHPLAN_RS27280Not AvailableNegative5778457 - 577960543289.7
udp-4-amino-4, 6-dideoxy-n-acetyl-beta-l-altrosamine transaminaseRHPLAN_RS27285Not AvailableNegative5779602 - 578081043147.8
udp-n-acetylglucosamine 4,6-dehydratase (inverting)RHPLAN_RS27290Not AvailableNegative5780818 - 578184637866.9

Displaying genes 5571 – 5580 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.