Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family protein | RHPLAN_RS27095 | Not Available | Negative | 5737570 - 5738568 | 35434.9 |
| transaldolase family protein | RHPLAN_RS27100 | Not Available | Negative | 5738738 - 5739073 | 11753.3 |
| lysylphosphatidylglycerol synthase transmembrane domain-containing protein | RHPLAN_RS27105 | Not Available | Positive | 5739086 - 5740054 | 34106.9 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | RHPLAN_RS27110 | Not Available | Negative | 5740088 - 5740882 | 29911.2 |
| lysylphosphatidylglycerol synthase domain-containing protein | RHPLAN_RS40640 | Not Available | Positive | 5741102 - 5741404 | 10156.6 |
| class i sam-dependent methyltransferase | RHPLAN_RS27120 | Not Available | Negative | 5741417 - 5742187 | 29296.2 |
| asparagine synthase (glutamine-hydrolyzing) | RHPLAN_RS27125 | Not Available | Negative | 5742273 - 5744186 | 69957.1 |
| gdp-mannose 4,6-dehydratase | RHPLAN_RS27130 | Not Available | Negative | 5744287 - 5745357 | 40666.4 |
| glycosyltransferase family a protein | RHPLAN_RS27135 | Not Available | Negative | 5745407 - 5746276 | 32888.6 |
| trans-aconitate 2-methyltransferase | RHPLAN_RS27140 | Not Available | Negative | 5746273 - 5747040 | 28907.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.