Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | RHPLAN_RS27045 | Not Available | Positive | 5727781 - 5728833 | 37635.4 |
| gnat family n-acetyltransferase | RHPLAN_RS27050 | Not Available | Positive | 5728820 - 5729686 | 30601.8 |
| abc transporter substrate-binding protein | RHPLAN_RS27055 | Not Available | Negative | 5729749 - 5730759 | 36501.6 |
| tetr family transcriptional regulator | RHPLAN_RS27060 | Not Available | Positive | 5730901 - 5731533 | 24467.6 |
| dihydrodipicolinate synthase family protein | RHPLAN_RS27065 | Not Available | Positive | 5731614 - 5732675 | 38301.3 |
| abc transporter permease | RHPLAN_RS27070 | Not Available | Positive | 5732752 - 5733519 | 28228.9 |
| abc transporter atp-binding protein | RHPLAN_RS27075 | Not Available | Positive | 5733522 - 5734286 | 28212.6 |
| nad(p)/fad-dependent oxidoreductase | RHPLAN_RS27080 | Not Available | Positive | 5734294 - 5735901 | 58947.7 |
| hypothetical protein | RHPLAN_RS27085 | Not Available | Negative | 5735913 - 5736284 | 13713.5 |
| degt/dnrj/eryc1/strs aminotransferase family protein | RHPLAN_RS27090 | Not Available | Negative | 5736377 - 5737531 | 41059.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.