Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RHPLAN_RS26845 | Not Available | Positive | 5686070 - 5688643 | 87918.3 |
| paai family thioesterase | RHPLAN_RS26850 | Not Available | Negative | 5688640 - 5689068 | 15874.2 |
| duf4286 family protein | RHPLAN_RS26855 | Not Available | Negative | 5689162 - 5689821 | 24750.9 |
| threonine/serine dehydratase | RHPLAN_RS26860 | Not Available | Negative | 5689831 - 5690829 | 34797.3 |
| hypothetical protein | RHPLAN_RS26865 | Not Available | Positive | 5691013 - 5691270 | 9617.7 |
| hypothetical protein | RHPLAN_RS26870 | Not Available | Negative | 5691360 - 5691767 | 14667.7 |
| hypothetical protein | RHPLAN_RS26875 | Not Available | Negative | 5691856 - 5692071 | 8241.82 |
| sdr family oxidoreductase | RHPLAN_RS26880 | Not Available | Positive | 5692281 - 5693060 | 26886.7 |
| fumarylacetoacetate hydrolase family protein | RHPLAN_RS26885 | Not Available | Positive | 5693248 - 5694099 | 30744.7 |
| outer membrane protein | RHPLAN_RS26890 | Not Available | Negative | 5694186 - 5694881 | 24575.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.