Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4337 domain-containing proteinRHPLAN_RS02675Not AvailableNegative560920 - 56156423030.3
tyrosine recombinase xercRHPLAN_RS02680Not AvailableNegative561605 - 56258235029.7
primosomal protein n'RHPLAN_RS02685Not AvailablePositive562665 - 56485480706.7
tripartite tricarboxylate transporter substrate binding proteinRHPLAN_RS02690Not AvailableNegative564865 - 56584834204.3
dmt family transporterRHPLAN_RS02695Not AvailableNegative565921 - 56682932401.7
quaternary ammonium compound efflux smr transporter sugeRHPLAN_RS02700Not AvailableNegative566910 - 56722410435.3
cynx/nimt family mfs transporterRHPLAN_RS02705Not AvailableNegative567246 - 56845142393.4
polysaccharide deacetylase family proteinRHPLAN_RS02710Not AvailablePositive568633 - 56954434699.7
hwe histidine kinase domain-containing proteinRHPLAN_RS02715Not AvailableNegative569828 - 57238393081.6
biliverdin-producing heme oxygenaseRHPLAN_RS02720Not AvailableNegative572380 - 57304222967.4

Displaying genes 541 – 550 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.