Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2fe-2s iron-sulfur cluster-binding protein | RHPLAN_RS26740 | Not Available | Negative | 5660845 - 5661165 | 11398.5 |
| hpt domain-containing protein | RHPLAN_RS26745 | Not Available | Negative | 5661273 - 5661629 | 12826.5 |
| hypothetical protein | RHPLAN_RS26750 | Not Available | Positive | 5662193 - 5667163 | 180316.0 |
| outer membrane protein | RHPLAN_RS26755 | Not Available | Negative | 5667265 - 5668608 | 47271.1 |
| n-acetyl-d-glu racemase dgca | RHPLAN_RS26760 | Not Available | Positive | 5668743 - 5669732 | 34974.3 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS26765 | Not Available | Positive | 5669733 - 5670698 | 34183.4 |
| hypothetical protein | RHPLAN_RS26770 | Not Available | Positive | 5670782 - 5671144 | 12036.3 |
| hypothetical protein | RHPLAN_RS26775 | Not Available | Positive | 5671196 - 5671642 | 16204.7 |
| tetratricopeptide repeat protein | RHPLAN_RS26780 | Not Available | Positive | 5671777 - 5673270 | 55854.7 |
| hypothetical protein | RHPLAN_RS26785 | Not Available | Positive | 5673425 - 5673841 | 15908.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.