Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vwa domain-containing protein | RHPLAN_RS26690 | Not Available | Negative | 5647784 - 5648956 | 45159.1 |
| diguanylate cyclase | RHPLAN_RS26695 | Not Available | Positive | 5649098 - 5650039 | 34091.6 |
| hypothetical protein | RHPLAN_RS26700 | Not Available | Positive | 5650179 - 5651555 | 49755.4 |
| hypothetical protein | RHPLAN_RS26705 | Not Available | Positive | 5651655 - 5653673 | 71522.2 |
| hypothetical protein | RHPLAN_RS26710 | Not Available | Negative | 5653683 - 5654774 | 39359.6 |
| isoquinoline 1-oxidoreductase subunit | RHPLAN_RS26715 | Not Available | Negative | 5654852 - 5655469 | 21974.0 |
| (2fe-2s)-binding protein | RHPLAN_RS26720 | Not Available | Negative | 5655489 - 5656013 | 18774.5 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | RHPLAN_RS26725 | Not Available | Negative | 5656010 - 5658748 | 97076.9 |
| nad(p)/fad-dependent oxidoreductase | RHPLAN_RS26730 | Not Available | Negative | 5659041 - 5660069 | 37118.3 |
| thioesterase family protein | RHPLAN_RS40250 | Not Available | Positive | 5660254 - 5660709 | 16669.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.