Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS26595 | Not Available | Negative | 5632734 - 5633708 | 34227.4 |
| hypothetical protein | RHPLAN_RS26600 | Not Available | Positive | 5633916 - 5634152 | 8827.21 |
| type ii toxin-antitoxin system rele/pare family toxin | RHPLAN_RS26605 | Not Available | Positive | 5634149 - 5634442 | 11035.2 |
| polysaccharide deacetylase family protein | RHPLAN_RS26610 | Not Available | Positive | 5634467 - 5635345 | 33759.8 |
| amidase | RHPLAN_RS26615 | Not Available | Positive | 5635342 - 5636526 | 40877.1 |
| hd domain-containing protein | RHPLAN_RS26620 | Not Available | Positive | 5636575 - 5637219 | 24346.8 |
| hypothetical protein | RHPLAN_RS39695 | Not Available | Negative | 5637259 - 5637408 | 5586.66 |
| response regulator transcription factor | RHPLAN_RS40820 | Not Available | Negative | 5637642 - 5638238 | 21793.4 |
| sensor histidine kinase kdpd | RHPLAN_RS26630 | Not Available | Negative | 5638254 - 5639321 | 38608.3 |
| hypothetical protein | RHPLAN_RS26635 | Not Available | Positive | 5639549 - 5639815 | 9780.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.