Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RHPLAN_RS26495 | Not Available | Positive | 5611346 - 5611690 | 12681.7 |
| tetratricopeptide repeat protein | RHPLAN_RS26500 | Not Available | Positive | 5611697 - 5613943 | 84042.2 |
| flagellin | RHPLAN_RS26505 | Not Available | Positive | 5614247 - 5615071 | 28702.5 |
| flagellin | RHPLAN_RS26510 | Not Available | Positive | 5615331 - 5616155 | 28468.2 |
| flagellar biosynthesis repressor flbt | RHPLAN_RS26515 | Not Available | Positive | 5616318 - 5616752 | 16392.1 |
| flagellar biosynthesis regulator flaf | RHPLAN_RS26520 | Not Available | Positive | 5616694 - 5617068 | 13791.5 |
| hypothetical protein | RHPLAN_RS26525 | Not Available | Negative | 5617417 - 5618910 | 51582.1 |
| flagellar hook-associated protein flgk | RHPLAN_RS26530 | Not Available | Negative | 5618917 - 5620761 | 63544.1 |
| flagellar hook protein flge | RHPLAN_RS26535 | Not Available | Negative | 5620840 - 5622195 | 46607.6 |
| peptide-methionine (r)-s-oxide reductase msrb | RHPLAN_RS26540 | Not Available | Negative | 5622423 - 5622965 | 19510.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.