Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
efflux rnd transporter periplasmic adaptor subunitRHPLAN_RS02625Not AvailableNegative548460 - 54959040119.4
malate dehydrogenaseRHPLAN_RS02630Not AvailablePositive549952 - 55092034188.8
adp-forming succinate--coa ligase subunit betaRHPLAN_RS02635Not AvailablePositive550992 - 55216141520.6
succinate--coa ligase subunit alphaRHPLAN_RS02640Not AvailablePositive552164 - 55304829974.6
2-oxoglutarate dehydrogenase e1 componentRHPLAN_RS02645Not AvailablePositive553257 - 556211110870.0
2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferaseRHPLAN_RS02650Not AvailablePositive556349 - 55758743645.8
hypothetical proteinRHPLAN_RS02655Not AvailablePositive557683 - 5579017860.73
dihydrolipoyl dehydrogenaseRHPLAN_RS02660Not AvailablePositive557898 - 55929848344.6
sdr family nad(p)-dependent oxidoreductaseRHPLAN_RS02665Not AvailablePositive559499 - 56026626909.5
hypothetical proteinRHPLAN_RS02670Not AvailablePositive560374 - 56091320926.7

Displaying genes 531 – 540 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.