Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bax inhibitor-1/ycca family protein | RHPLAN_RS02575 | Not Available | Negative | 536412 - 537236 | 29854.2 |
| abc transporter permease | RHPLAN_RS02580 | Not Available | Negative | 537434 - 539989 | 89886.4 |
| hypothetical protein | RHPLAN_RS02585 | Not Available | Negative | 540006 - 540653 | 24391.6 |
| abc transporter atp-binding protein | RHPLAN_RS02590 | Not Available | Negative | 540660 - 541385 | 25359.5 |
| arylesterase | RHPLAN_RS02595 | Not Available | Positive | 541495 - 542097 | 21012.4 |
| rna 2',3'-cyclic phosphodiesterase | RHPLAN_RS02600 | Not Available | Positive | 542208 - 542744 | 19859.8 |
| hypothetical protein | RHPLAN_RS02605 | Not Available | Negative | 542752 - 543165 | 15324.4 |
| gnat family n-acetyltransferase | RHPLAN_RS02610 | Not Available | Negative | 543226 - 543822 | 21617.1 |
| cell division protein zape | RHPLAN_RS02615 | Not Available | Positive | 544132 - 545304 | 44138.0 |
| efflux rnd transporter permease subunit | RHPLAN_RS02620 | Not Available | Negative | 545306 - 548449 | 112797.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.