Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dsbe family thiol:disulfide interchange protein | RHPLAN_RS02525 | Not Available | Negative | 527215 - 527811 | 21162.8 |
| heme exporter protein ccmd | RHPLAN_RS02530 | Not Available | Negative | 527808 - 527993 | 6782.39 |
| heme abc transporter permease | RHPLAN_RS02535 | Not Available | Negative | 527996 - 528736 | 26988.7 |
| heme exporter protein ccmb | RHPLAN_RS02540 | Not Available | Negative | 528778 - 529446 | 22745.1 |
| heme abc exporter atp-binding protein ccma | RHPLAN_RS02545 | Not Available | Negative | 529443 - 530048 | 20915.4 |
| aconitate hydratase acna | RHPLAN_RS02550 | Not Available | Positive | 530292 - 533069 | 101545.0 |
| thioredoxin family protein | RHPLAN_RS02555 | Not Available | Positive | 533196 - 533969 | 27548.8 |
| duf2794 domain-containing protein | RHPLAN_RS02560 | Not Available | Positive | 534392 - 534757 | 13493.3 |
| gnat family n-acetyltransferase | RHPLAN_RS02565 | Not Available | Negative | 534846 - 535370 | 19292.1 |
| bax inhibitor-1/ycca family protein | RHPLAN_RS02570 | Not Available | Negative | 535449 - 536204 | 26991.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.