Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinRHPLAN_RS02425Not AvailablePositive510842 - 5110517351.11
hypothetical proteinRHPLAN_RS02430Not AvailablePositive511212 - 5114849658.35
hypothetical proteinRHPLAN_RS02435Not AvailablePositive511630 - 51193211047.1
3-isopropylmalate dehydratase large subunitRHPLAN_RS02440Not AvailableNegative511993 - 51339650923.6
50s ribosomal protein l19RHPLAN_RS02445Not AvailableNegative513709 - 51411014707.6
trna (guanosine(37)-n1)-methyltransferase trmdRHPLAN_RS02450Not AvailableNegative514224 - 51494325575.0
ribosome maturation factor rimmRHPLAN_RS02455Not AvailableNegative515046 - 51554918036.6
30s ribosomal protein s16RHPLAN_RS02460Not AvailableNegative515565 - 51592113360.3
signal recognition particle proteinRHPLAN_RS02465Not AvailableNegative515968 - 51752754520.4
ceramidase domain-containing proteinRHPLAN_RS02470Not AvailablePositive517903 - 51864027076.5

Displaying genes 491 – 500 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.