Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate-semialdehyde dehydrogenase | RHPLAN_RS02375 | Not Available | Positive | 503724 - 504758 | 37692.3 |
| carbonic anhydrase | RHPLAN_RS02380 | Not Available | Negative | 504766 - 505404 | 22912.6 |
| coa ester lyase | RHPLAN_RS02385 | Not Available | Positive | 506282 - 507163 | 31809.3 |
| transporter substrate-binding domain-containing protein | RHPLAN_RS02390 | Not Available | Positive | 507224 - 508027 | 28388.3 |
| hypothetical protein | RHPLAN_RS02395 | Not Available | Negative | 508040 - 508360 | 11654.9 |
| 3-isopropylmalate dehydratase small subunit | RHPLAN_RS02400 | Not Available | Negative | 508402 - 509007 | 22529.9 |
| antibiotic biosynthesis monooxygenase | RHPLAN_RS02405 | Not Available | Negative | 509055 - 509378 | 12805.3 |
| gfa family protein | RHPLAN_RS02410 | Not Available | Negative | 509482 - 509892 | 14643.5 |
| metallopeptidase family protein | RHPLAN_RS02415 | Not Available | Negative | 509974 - 510426 | 16946.1 |
| hypothetical protein | RHPLAN_RS02420 | Not Available | Positive | 510507 - 510845 | 12571.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.