Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin-dependent oxidoreductase | RHPLAN_RS02325 | Not Available | Positive | 494989 - 495762 | 29027.7 |
| duf1003 domain-containing protein | RHPLAN_RS02330 | Not Available | Negative | 495831 - 496574 | 28498.1 |
| magnesium-protoporphyrin ix monomethyl ester anaerobic oxidative cyclase | RHPLAN_RS02335 | Not Available | Negative | 496656 - 498203 | 59028.3 |
| eama family transporter | RHPLAN_RS02340 | Not Available | Negative | 498359 - 499219 | 29888.0 |
| 3-isopropylmalate dehydrogenase | RHPLAN_RS02345 | Not Available | Positive | 499451 - 500563 | 40088.8 |
| voc family protein | RHPLAN_RS02350 | Not Available | Positive | 500606 - 501001 | 14318.1 |
| hypothetical protein | RHPLAN_RS02355 | Not Available | Negative | 501020 - 501325 | 11428.4 |
| molybdopterin-dependent oxidoreductase | RHPLAN_RS02360 | Not Available | Positive | 501649 - 502863 | 43384.2 |
| hypothetical protein | RHPLAN_RS02365 | Not Available | Positive | 502876 - 503157 | 10032.1 |
| hypothetical protein | RHPLAN_RS02370 | Not Available | Positive | 503370 - 503552 | 6104.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.