Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| siderophore-interacting protein | RHPLAN_RS02275 | Not Available | Negative | 486516 - 487319 | 29319.5 |
| succinate dehydrogenase iron-sulfur subunit | RHPLAN_RS02280 | Not Available | Negative | 487481 - 488260 | 29769.5 |
| succinate dehydrogenase flavoprotein subunit | RHPLAN_RS02285 | Not Available | Negative | 488311 - 490143 | 66766.0 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | RHPLAN_RS02290 | Not Available | Negative | 490147 - 490545 | 14366.0 |
| succinate dehydrogenase, cytochrome b556 subunit | RHPLAN_RS02295 | Not Available | Negative | 490542 - 490958 | 15417.5 |
| lysr family transcriptional regulator | RHPLAN_RS02300 | Not Available | Positive | 491193 - 492128 | 33930.0 |
| superoxide dismutase family protein | RHPLAN_RS02305 | Not Available | Positive | 492209 - 492811 | 20368.2 |
| maoc family dehydratase | RHPLAN_RS02310 | Not Available | Negative | 492821 - 493870 | 38419.7 |
| pentapeptide mxkdx repeat protein | RHPLAN_RS02315 | Not Available | Positive | 494041 - 494274 | 8106.04 |
| cytochrome b/b6 domain-containing protein | RHPLAN_RS02320 | Not Available | Positive | 494356 - 494979 | 22597.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.