Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | RHPLAN_RS02225 | Not Available | Negative | 478399 - 479238 | 30098.8 |
| abc transporter permease | RHPLAN_RS02230 | Not Available | Negative | 479248 - 480051 | 28809.1 |
| abc transporter atp-binding protein | RHPLAN_RS02235 | Not Available | Negative | 480054 - 480824 | 28366.7 |
| hypothetical protein | RHPLAN_RS02240 | Not Available | Positive | 481085 - 481393 | 10457.6 |
| tetratricopeptide repeat protein | RHPLAN_RS02245 | Not Available | Negative | 481462 - 483357 | 68731.6 |
| argininosuccinate synthase | RHPLAN_RS02250 | Not Available | Positive | 483547 - 484791 | 46077.3 |
| hypothetical protein | RHPLAN_RS02255 | Not Available | Positive | 484826 - 485128 | 10345.8 |
| pyridoxamine 5'-phosphate oxidase family protein | RHPLAN_RS02260 | Not Available | Negative | 485125 - 485634 | 18732.2 |
| hypothetical protein | RHPLAN_RS02265 | Not Available | Positive | 485764 - 486012 | 9124.64 |
| is5/is1182 family transposase | RHPLAN_RS38085 | Not Available | Negative | 486019 - 486407 | 13536.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.