Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radical sam protein | RHPLAN_RS02175 | Not Available | Negative | 468888 - 470324 | 54105.0 |
| prolipoprotein diacylglyceryl transferase family protein | RHPLAN_RS02180 | Not Available | Negative | 470305 - 471027 | 25777.6 |
| taxi family trap transporter solute-binding subunit | RHPLAN_RS02185 | Not Available | Negative | 471080 - 472612 | 54663.7 |
| 4a-hydroxytetrahydrobiopterin dehydratase | RHPLAN_RS02190 | Not Available | Positive | 472796 - 473089 | 10755.9 |
| ykva family protein | RHPLAN_RS02195 | Not Available | Positive | 473224 - 473541 | 11742.3 |
| nadph:quinone oxidoreductase family protein | RHPLAN_RS02200 | Not Available | Negative | 473546 - 474520 | 34080.0 |
| invasion associated locus b family protein | RHPLAN_RS02205 | Not Available | Positive | 474692 - 475252 | 19749.4 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | RHPLAN_RS02210 | Not Available | Positive | 475324 - 476547 | 44842.5 |
| hypothetical protein | RHPLAN_RS02215 | Not Available | Positive | 476554 - 477063 | 17781.0 |
| abc transporter substrate-binding protein | RHPLAN_RS02220 | Not Available | Positive | 477246 - 478262 | 36703.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.