Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin oxidoreductase family protein | RHPLAN_RS02130 | Not Available | Negative | 459132 - 461972 | 104814.0 |
| Trna-ala | Not Available | Not Available | Positive | 462191 - 462266 | Not Available |
| yggt family protein | RHPLAN_RS02140 | Not Available | Positive | 462441 - 462731 | 11150.3 |
| duf167 family protein | RHPLAN_RS02145 | Not Available | Positive | 462736 - 463059 | 10798.2 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | RHPLAN_RS02150 | Not Available | Positive | 463142 - 464026 | 30440.3 |
| hypothetical protein | RHPLAN_RS02155 | Not Available | Positive | 464066 - 464695 | 22256.4 |
| gnat family n-acetyltransferase | RHPLAN_RS02160 | Not Available | Negative | 464816 - 465325 | 19043.6 |
| s9 family peptidase | RHPLAN_RS02165 | Not Available | Positive | 465590 - 466363 | 27401.6 |
| translational gtpase typa | RHPLAN_RS02170 | Not Available | Negative | 466367 - 468193 | 67291.6 |
| hypothetical protein | RHPLAN_RS38940 | Not Available | Negative | 468400 - 468579 | 5881.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.