Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system f family protein | RHPLAN_RS02080 | Not Available | Positive | 449491 - 450465 | 35812.8 |
| type ii secretion system f family protein | RHPLAN_RS02085 | Not Available | Positive | 450481 - 451431 | 34630.2 |
| tetratricopeptide repeat protein | RHPLAN_RS02090 | Not Available | Positive | 451557 - 452177 | 22351.5 |
| terb family tellurite resistance protein | RHPLAN_RS02095 | Not Available | Positive | 452269 - 452736 | 17027.1 |
| sdr family oxidoreductase | RHPLAN_RS02100 | Not Available | Positive | 452733 - 453521 | 27954.4 |
| glutamine amidotransferase | RHPLAN_RS02105 | Not Available | Positive | 453689 - 454450 | 28848.6 |
| mfs transporter | RHPLAN_RS02110 | Not Available | Negative | 454417 - 455646 | 43628.3 |
| sensor histidine kinase | RHPLAN_RS02115 | Not Available | Positive | 455876 - 457330 | 54364.7 |
| dmsc/ynfh family molybdoenzyme membrane anchor subunit | RHPLAN_RS02120 | Not Available | Negative | 457420 - 458373 | 34252.6 |
| 4fe-4s dicluster domain-containing protein | RHPLAN_RS02125 | Not Available | Negative | 458386 - 459135 | 27164.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.