Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease d | RHPLAN_RS01975 | Not Available | Negative | 429497 - 430114 | 22751.5 |
| cupin domain-containing protein | RHPLAN_RS01980 | Not Available | Negative | 430157 - 431263 | 40761.8 |
| hypothetical protein | RHPLAN_RS01985 | Not Available | Positive | 431425 - 431664 | 9011.8 |
| d-glycerate dehydrogenase | RHPLAN_RS01990 | Not Available | Negative | 431717 - 432721 | 36759.1 |
| sh3 domain-containing protein | RHPLAN_RS01995 | Not Available | Positive | 432919 - 433500 | 21177.6 |
| hypothetical protein | RHPLAN_RS02000 | Not Available | Negative | 433508 - 434272 | 27496.7 |
| iron response transcriptional regulator irra | RHPLAN_RS02005 | Not Available | Negative | 434385 - 434885 | 18581.3 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase faba | RHPLAN_RS02010 | Not Available | Positive | 435303 - 435833 | 19389.9 |
| beta-ketoacyl-acp synthase i | RHPLAN_RS02015 | Not Available | Positive | 435958 - 437178 | 43003.2 |
| enoyl-acp reductase fabi | RHPLAN_RS02020 | Not Available | Positive | 437245 - 438069 | 29316.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.